Western Blotting
Related Technologies
After separation of proteins by PAGE, the next step is to transfer the proteins from the gel to a solid support membrane, usually made of a chemically inert substrate such as nitrocellulose or polyvinylidene difluoride (PVDF).
Specific antibodies can then be used to detect the “blotted” proteins, which are immobilized at exactly their migration positions in the gel at the time point when the electric current was stopped.
Electrotransfer is the most commonly used method of transfer. Two types of electrotransfer, wet transfer and semidry transfer, are commonly used. GE Healthcare provides tank blotting instruments for high performance wet transfer as well as semidry blotting instruments.
During wet transfer, the gel and membrane are fully immersed in transfer buffer and current is applied in the direction of gel to membrane. Wet transfer is recommended for larger proteins or when it is important to obtain the best possible transfer efficiency. Our blotting instruments using wet transfer include: miniVE, TE22, and TE62.
For semidry transfer, several layers of filter paper soaked in transfer buffer are used to sandwich the gel and membrane. The sandwich is placed between two glass plates that form an anode and cathode when electric current is applied. Semidry transfer is faster than wet transfer and consumes less buffer. Our blotting instruments using semidry transfer include: TE70, TE77, and Multiphor II with NovaBlot Kit.
Electrically conducting transfer buffer provides electrical continuity between the electrodes of the transfer apparatus. In addition, the buffer provides a chemical environment that maintains protein solubility without interfering with its capacity to bind the membrane.
Towbin buffer is the most commonly used buffer in wet transfer, and consists of Tris and glycine. The pH of this buffer is 8.3, which is higher than the isoelectric point (pI) of most proteins, and ensures migration of negatively charged proteins (coated with SDS) toward the anode.
The degree to which molecules bind to a membrane is greatly influenced by the chemistry of the membrane itself as well as pore size, which ranges from 0.05 to 10 µm in diameter. A membrane with many small pores has a larger binding surface than one with larger pores, and thus generally has a higher binding capacity.
It should be noted that although protein conformation and buffer composition also affect binding capacity, the overall sensitivity of the assay depends on the amount of immobilized protein that is presented to the primary antibody. Nitrocellulose and PVDF membranes are the most common types of membranes used for Western blotting, although nylon is also sometimes used.
|
Nitrocellulose membranes |
PVDF membranes |
||||||
|
|
Hybond ECL |
Hybond-C Extra
|
Protran |
Hybond-LFP1 |
Hybond-P |
Westran S |
Westran CS |
|
Amersham ECL |
+++ |
+ |
++ |
+ |
+++ |
++ |
++ |
|
Amersham ECL Prime |
++/+++ |
+ |
++ |
Nt |
+++ |
++ |
++ |
|
Amersham ECL Plex |
+++ |
- |
++ |
+++ |
- |
- |
- |
|
ECF |
+ |
- |
- |
Nt |
+++ |
- |
- |
|
Colorimetric |
+++ |
+ |
++ |
Nt |
++ |
++ |
++ |
|
Radioactive |
+ |
++ |
++ |
Nt |
+ |
++ |
++ |
+ = Suitable, ++ = Recommended, +++ = Highly recommended, - = Not recommended, nt = Not tested. ¹Hybond-LFP is developed for fluorescence and has not been validated for other detection reagents.
Several methods allow you to test whether all proteins have transferred from the gel to the membrane. Total protein stains can be used to stain either the gel or membrane electrotransfer.
The use of visible, prestained molecular weight markers such as Rainbow Markers or DualVue Markers is a simple and convenient way to gauge the transfer of all proteins across the range of molecular weights of proteins in the gel, as high and low molecular weight proteins migrate with different efficiencies under similar electrophoretic conditions.


